Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------QAPPPVQCDPGKLSACAVPIF----------------------FGTAPSKSCCSNLRAQEKDGCFCQYARDPMYASYINSTN-ARNTIAACG-IAFPS---C------------------------------- |
| 1QNT Chain:A ((6-176)) | EMKRTTLDSPLGKLELSGCEQGLHEIKLLGKDAVEVPAPAAVLGGPEPLMQCTAWLNAYFHQPEAIEEFPVPALHHPVFQQESFTRQVLWKLLKVVKFGEVISYQQ---LAALAGNPKAARAVGGAMRGNPVPILIPCHRVVCSSGAVGNYSGGLAVKEWLLAHEGHRL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QNT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21649 for 380 contacts (-57.0/contact) +
2D Compatibility (PS) -7486 + (NN) -2354 + (LL) -8
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -35097.0 ( -92.36 by residue)
QMean score : 0.311
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