Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
EDTGDTGNVGVTC-----DARQLQPCLAAIT--GGGQPS-----------GACCAKLTE-QQSCLCGFAK----NPAFAQYISS--PNARKVLLACNVAYPTC--
1S6D Chain:A ((1-103))
--PYGRGRTESGCYQQMEEAEMLNHCGMYLMKNLGERSQVSPRMREEDHKQLCCMQLKNLDEKCMCPAIMMMLNEPMWIRMRDQVMSMAHNLPIECNLMSQPCQM
General information:
TITO was launched using:
RESULT:
Template:
1S6D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43961 for 455 contacts (-96.6/contact) +
2D Compatibility (PS) -7518 + (NN) -2904 + (LL) 28
1D Compatibility (HY) -4000 + (ID) 800
Total energy: -59155.0 ( -130.01 by residue)
QMean score : 0.448
(partial model without unconserved sides chains):
PDB file :
Tito_1S6D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S6D-query.scw
PDB file :
Tito_Scwrl_1S6D.pdb
: