Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-IDLCGMSQDELNECKPAVSKENPTSPSQPCCTALQHA--------DFACLCGYKNSPWLGSFGVDPELASALPKQCGLANA------PTC----
1FK5 Chain:A ((1-93))
AIS-CGQVASAIAPCISYARGQGSG-PSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16330 for 492 contacts (-33.2/contact) +
2D Compatibility (PS) -7710 + (NN) -3843 + (LL) 148
1D Compatibility (HY) -2000 + (ID) 850
Total energy: -30585.0 ( -62.16 by residue)
QMean score : 0.339
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: