Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
KDECGATPPDQEALKLVPCVAAGKDPDSKPSDRCCAAVKEIGER-----SPACLCAVLLSKIVRRVGVKPEVAITIPKRCDLTDRPIGYKCGDYTMPSLQLKD-----
1FK5 Chain:A ((1-93))
-----AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVS---IPYTISTST-------DCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -18704 for 578 contacts (-32.4/contact) +
2D Compatibility (PS) -8849 + (NN) -7354 + (LL) 436
1D Compatibility (HY) -2400 + (ID) 1100
Total energy: -37971.0 ( -65.69 by residue)
QMean score : 0.285
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: