Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DGAGECGATPPDKMALKLAPCASAAKDPKSTPSSGCCTAVHTIGK-QSPKCLCAVMLSSTTRNAGI-KPEVAIT-IPKRCNIADRPVGYKCGDYTLP
1HYP Chain:? ((6-80))
---PSCPD---------LSICLNILGG-SLGTVDDCCALIGGLGDIEAIVCLCIQLRA-----LGILNLNRNLQLILNSCG-RSYPSNATCPRT---
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45730 for 469 contacts (-97.5/contact) +
2D Compatibility (PS) -7423 + (NN) -2288 + (LL) 496
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -59695.0 ( -127.28 by residue)
QMean score : 0.205
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: