Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QATATAPSCTDVISNTAPCLPYIS----RTSPAP-----SDVCCAGIKNVAAMASTHANQVDICTCLKSNIAGF----S-------Y-D---------PTLIAAL--PKKCSVSINLLPISASTDCSKVSLGN
1BEA Chain:A ((15-109))
-------------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI-----------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36470 for 382 contacts (-95.5/contact) +
2D Compatibility (PS) -6165 + (NN) -266 + (LL) 2428
1D Compatibility (HY) -3600 + (ID) 650
Total energy: -44723.0 ( -117.08 by residue)
QMean score : 0.297
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: