Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------------------------------------------------------------AISCGQVSSALRPCISYASGNGGILPPAC-CSGVKRLAGAAQ-----------STADKQAACKCIKS--------AAGGLNAGKAAGIPSMCGVSVPYAISASVDCSKIR-------- |
1QPO Chain:A ((116-284)) | IATATAAWVDAVRGTKAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAA------GSVVDALRAVRNAAPDLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQTAATYAE-TGVDY---LAVGALTHSVRVLDIGLDM |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QPO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -24720 for 419 contacts (-59.0/contact) +
2D Compatibility (PS) -8434 + (NN) -815 + (LL) 444
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -36275.0 ( -86.58 by residue)
QMean score : 0.313
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