Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ADNDCAVAQTAFGDCAGYVAGVEN---------------KLSPRCCRALADIRDMAPTFVRQRALCACIHKEMVAAG---KV-------VTRRAAALPGRCGVRISFLPTTHNFDCSRIPRAD
1SM7 Chain:A ((13-100))
---------QHLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE--------DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQ------------------
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -54463 for 427 contacts (-127.5/contact) +
2D Compatibility (PS) -6399 + (NN) 573 + (LL) 1804
1D Compatibility (HY) -3200 + (ID) 550
Total energy: -62235.0 ( -145.75 by residue)
QMean score : 0.284
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: