Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVSCGTVTGDLAPCIPYLT----GGAG------PTDSCCAGVKKLLAAAPTTADRQAACNCLKTAAGNIN-------N---LN----------PGNAAAL--PGKCNVNIPYKISTTTNCNTIKF
1BEA Chain:A ((15-110))
--------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATIS-------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37104 for 394 contacts (-94.2/contact) +
2D Compatibility (PS) -6338 + (NN) 261 + (LL) 1948
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -45633.0 ( -115.82 by residue)
QMean score : 0.462
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: