Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-QCDPEQLVACASPIFYGTAPSESCCSNLR---EQQKEGCLCQYAKDPMYASYVNNTNARKTIAA-CGIPIPS---C---
1HYP Chain:? ((6-80))
PSCP--DLSICLNILGGSLGTVDDCCALIGGLGDIEAIVCLCIQLRALGI---LNLNRNLQLILNSCGRSYPSNATCPRT
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23852 for 395 contacts (-60.4/contact) +
2D Compatibility (PS) -6694 + (NN) -2896 + (LL) 172
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -38020.0 ( -96.25 by residue)
QMean score : 0.425
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: