Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------VTCSPAQL---SPCVGAITSSSPPSGLCCSKVRQQKPCLCQYMKNPYLRKFVNTPNAKKVASQCRTPFPRC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 1PS6 Chain:A ((1-328)) | VKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLTNRAAMLGLPLTLRPYSPNSPAQPQTAGTLTLLPVALRAPVTAGQLAVENGHYVVETLARACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRVALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHMGTEEIDTIIPVLNELRAQGMKLNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQGFGRGVNITLGLPFIRTSVDHGTALELAGRGKADVGSFITALNLAIKMIVNTQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PS6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7501 for 336 contacts (-22.3/contact) +
2D Compatibility (PS) -7490 + (NN) -5261 + (LL) 0
1D Compatibility (HY) 1200 + (ID) 500
Total energy: -19552.0 ( -58.19 by residue)
QMean score : 0.277
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