Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-EDCSNAMDKLAPCTSAVGLSSNGVKPSSECCDALKGTS--------TSCVCKSVRAVIS------------LPAKCNL-------PALTCSGSR--
1FK5 Chain:A ((1-93))
AISCGQVASAIAPCISYA--RGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDC--SRVN
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17933 for 395 contacts (-45.4/contact) +
2D Compatibility (PS) -6343 + (NN) -1812 + (LL) -196
1D Compatibility (HY) -1600 + (ID) 850
Total energy: -28734.0 ( -72.74 by residue)
QMean score : 0.459
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: