Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MTLCDIDDKGLADCKPSVTQPNPVDPSPDCCEALKGAD------------LACLCSYKNSMWLPSFGIDPMLALSLPPKCNLQMP------PNC----
1FK5 Chain:A ((1-93))
AIS-CGQVASAIAPCISYARGQGSG-PSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAG--VS--GLNAGNAASIPSKCGVSIPYTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17847 for 460 contacts (-38.8/contact) +
2D Compatibility (PS) -7452 + (NN) -8828 + (LL) 568
1D Compatibility (HY) -3600 + (ID) 850
Total energy: -38009.0 ( -82.63 by residue)
QMean score : 0.268
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: