Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QDPITPGPTIADCSPRLVALMPCAPFVQGTAQMPAQSCCDNLNQLYTL-----QPGCLCLLLNDTTLSDFPINRTRALQLPVLCKLQANASACSEID-----
1FK5 Chain:A ((1-93))
---------AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52067 for 578 contacts (-90.1/contact) +
2D Compatibility (PS) -8199 + (NN) -2410 + (LL) -240
1D Compatibility (HY) 1200 + (ID) 800
Total energy: -62516.0 ( -108.16 by residue)
QMean score : 0.198
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: