Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DWAEDKKECSNQLVALSTCIPFVGGNTKVPDSTCCTNLRKKINQT-KKCLCLLVADRNDPDLGFKVNATLALILPSI-CHAPSNAS-ECPAEANKSSQ
1HYP Chain:? ((6-80))
------PSCP----DLSICLN-ILGGSLGTVDDCCALIGGLGDIEAIVCLCIQLRA-----LGI-LNLNRNLQLILNSCGRSYPSNATCPRT------
General information:
TITO was launched using:
RESULT:
Template:
1HYP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41607 for 446 contacts (-93.3/contact) +
2D Compatibility (PS) -7485 + (NN) -4899 + (LL) 840
1D Compatibility (HY) -5600 + (ID) 900
Total energy: -59651.0 ( -133.75 by residue)
QMean score : 0.300
(partial model without unconserved sides chains):
PDB file :
Tito_1HYP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HYP-query.scw
PDB file :
Tito_Scwrl_1HYP.pdb
: