Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--ACS--LSQVRTCTSAVIAPNQMPSQQCCSELSAITD-----------FNCFCSMLLNQGTNLNQDYINNALLIPSKCGEQGRNLRGQRCGNYAI-P--------
1FK5 Chain:A ((1-93))
AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAG-VSGLNAGNAAS---IPSKC---GVSI------PYTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49505 for 449 contacts (-110.3/contact) +
2D Compatibility (PS) -7162 + (NN) -3767 + (LL) 700
1D Compatibility (HY) -2400 + (ID) 1050
Total energy: -63184.0 ( -140.72 by residue)
QMean score : 0.380
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: