Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
--YC--FLADIQPCIPAIKATGPRQAPTAACCDSIS------KT----SQVCLC--QAVSGPETPRAGLSVGKALVLPLECGINVP---SGTT-CAKFFLVVFDLVFA
1FK5 Chain:A ((1-93))
AISCGQVASAIAPCISYA--RGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAAS----IPSKCGVSIPYTISTSTDCSRVN---------
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38756 for 435 contacts (-89.1/contact) +
2D Compatibility (PS) -7667 + (NN) -6414 + (LL) 2044
1D Compatibility (HY) -2400 + (ID) 1200
Total energy: -54393.0 ( -125.04 by residue)
QMean score : 0.264
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: