Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QREPAKCGSSDAGSVLMPCFAFLEQQSREPSARCCSAVANSTQKEPP----RCLCVFLDQLARA---MNRTQPLQLPSLCGDARL----TAERCKGLFVANRFA
1FK5 Chain:A ((1-93))
-----AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRV---N---
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27128 for 545 contacts (-49.8/contact) +
2D Compatibility (PS) -8398 + (NN) -2963 + (LL) 1172
1D Compatibility (HY) -2400 + (ID) 1150
Total energy: -40867.0 ( -74.99 by residue)
QMean score : 0.169
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: