Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
TVPCGTVDMKAAACVGYAT----GKEPKP-----SPACCSGLQQLAGTVKTVDDKKNICRCLKNGVKAFA-------G---VQ----------DKFLSQI--PAVCNIKVGFPVSLNTNCEA
1BEA Chain:A ((15-109))
--------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI-----------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34798 for 389 contacts (-89.5/contact) +
2D Compatibility (PS) -6392 + (NN) -2223 + (LL) 1132
1D Compatibility (HY) -2400 + (ID) 700
Total energy: -45381.0 ( -116.66 by residue)
QMean score : 0.399
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: