Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---DMS---------PTECKVETKLAGNACLAVLYGKSPSADCCQRVRVTHVECVCPYVSPKVASIIRAYGLNKLIKKIEGCGRAVPHNLKCGSITIP
1DQ3 Chain:A ((336-414))
GNFGLPLNFNAFKEWASEYGVEFKTNGSQTIAIINDERISLGQWHTRNRVSK----AVLVKMLRKLYEATKDEEVKRMLHLIE---------------
General information:
TITO was launched using:
RESULT:
Template:
1DQ3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25781 for 425 contacts (-60.7/contact) +
2D Compatibility (PS) -6920 + (NN) 2535 + (LL) 1084
1D Compatibility (HY) -2000 + (ID) 400
Total energy: -31482.0 ( -74.08 by residue)
QMean score : 0.427
(partial model without unconserved sides chains):
PDB file :
Tito_1DQ3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DQ3-query.scw
PDB file :
Tito_Scwrl_1DQ3.pdb
: