Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGKTPIQSAAASLSSCLSAAGNAKAKVPPTCCTKVTALINTAP-----KCLCAVVLSPLAKKAGIKPAIAITIPKRCNIK-NRPVG--KKCGSYIIP
1FK5 Chain:A ((1-93))
-----AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN--
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43369 for 592 contacts (-73.3/contact) +
2D Compatibility (PS) -8835 + (NN) -3892 + (LL) 24
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -60572.0 ( -102.32 by residue)
QMean score : 0.371
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: