Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DLSCGQVLSTLYPCLGYIRNP----GASV-----PAPCCNGIRIVNDEAKNTSDRQSVCRCLKSTI-VL--P-G---------I---------NLDALANLPTNCGVNLPYKITPDIDCNKIPY
1B1U Chain:A ((15-109))
--------NPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--------PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIH-------------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -41746 for 403 contacts (-103.6/contact) +
2D Compatibility (PS) -6183 + (NN) 1737 + (LL) 972
1D Compatibility (HY) -2800 + (ID) 550
Total energy: -48570.0 ( -120.52 by residue)
QMean score : 0.246
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: