Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MLQRNFLIWLLASLFYAY-QYILRVIPNIIAPELITK----FNISIADIGQFGGLYYIGYTFAHIPVGFALDRFGPKFVLPICVVLTFVGTL------------------PLIYFDEWYYLTFSRIIVGVGSSASAIGIFKIASTYFSQKKSAKMASLSIIVGLLGAIYGGLPLNFLFNK--------FGWDYVIYAFSTFGCLLALLLFFI--TPNNSTEKNVSGNVFQDLKTV-----LFNKHIILISFFSGLMVGPLEGFADG----WAKAFLCEVYQMTG-DLASLLSSLIFI--GMGAGSFFLAYFLERHPNRHYEAIIACSLAMIASFLLLFAQAGGLYVVLPTLLIIGFASGYQVIAIYKAISYVDNSLVGLTTAVSNMIIMVFGYFFH-TGIAKIVDLCWDRTVIQ--GNPVYGSELLIKAI----SIIPICLLLAVFWFVWLKKRS---------------- |
| 4GC0 Chain:A ((5-479)) | YNSSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTGGRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GC0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -415024 for 3533 contacts (-117.5/contact) +
2D Compatibility (PS) -40866 + (NN) -4210 + (LL) 0
1D Compatibility (HY) -19200 + (ID) 2900
Total energy: -482200.0 ( -136.48 by residue)
QMean score : 0.199
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