Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSNFCKIIYGNNDNQLSEKSYKSSVCNDDLFNGNEEDFVILENEKMYKTKAEFESEGYKII
2KSL Chain:A ((15-25))
-----------------EFNYKSNVCNGCGDQVAACEAECFRNDVYTACHEAQK-------
General information:
TITO was launched using:
RESULT:
Template:
2KSL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1378 for 35 contacts (39.4/contact) +
2D Compatibility (PS) -1088 + (NN) 201 + (LL) 636
1D Compatibility (HY) -1200 + (ID) 350
Total energy: -423.0 ( -12.09 by residue)
QMean score : 0.114
(partial model without unconserved sides chains):
PDB file :
Tito_2KSL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KSL-query.scw
PDB file :
Tito_Scwrl_2KSL.pdb
: