Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------MLSKTCNAIKRLLQKESSFVGKDENGNSYYESSEGKRWVMYSNVSEPTTVSPEWHVWLHYTDDAMP-VNSKKRKIKRIPNLTGTKDAYYPNQKIKNYYERWNPNN-------- |
| 4NK2 Chain:A ((30-193)) | AESGSICEARIDFVFPEVKFPSKKVYLAAGEELLRKLVEVHHENLMKSKIHYLFPTSHEQLRSLVKRSADFVVEMCGGPPYYTLTRGEP-KMRARHFSVTIDEKAREIWLACYKHALKDVHFPLSVLEEFWQWIESFSIRMINRRTTLEPPRRVPYSEIQDFFVS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NK2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 28177 for 590 contacts (47.8/contact) +
2D Compatibility (PS) -10672 + (NN) 1078 + (LL) 156
1D Compatibility (HY) -3600 + (ID) 800
Total energy: 14339.0 ( 24.30 by residue)
QMean score : 0.121
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