Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTL-EYTLTTNSVEVTVLPVYIEEQSIPYENCYVWMYNVKIKNKSLSTIQLLSRHWQIIDYKGKINEIVGAGVIGEQPVIKPGEVFKYTSGTYLNAPSGIMQGKYEFLNEENTKVFEVTIPSFSLDSPYTNIRPH
3NRF Chain:A ((5-106))
DAVMVFARQGDKGSVSVGD----------KHFRTQAFKVRLVNAAKSEISLKNSCLVAQSAAGQSFRLDTVDEELTADTLKPGASVE---------------GDAIFASE-DDAVYGASLVRLSDRCK-------
General information:
TITO was launched using:
RESULT:
Template:
3NRF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27079 for 690 contacts (-39.2/contact) +
2D Compatibility (PS) -10985 + (NN) -1271 + (LL) 1840
1D Compatibility (HY) 1600 + (ID) 800
Total energy: -36695.0 ( -53.18 by residue)
QMean score : 0.351
(partial model without unconserved sides chains):
PDB file :
Tito_3NRF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NRF-query.scw
PDB file :
Tito_Scwrl_3NRF.pdb
: