Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------------------------------------------------------------------------MKMVKGILCDWLGVTELQESQKIDAEQFQRIFSALKKWQEAQKVNTEQFEKVFSALEEKIGTEQFQSMQEYLNGLQKKFTGLEEKAGTLIETVGEQEKIMLTCCIIASVITLAAISFITFCIYQGVKSGRERQRSLSDISAQNLMNQTHQAQNFM------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 1J5S Chain:A ((0-450)) | HMFLGEDYLLTNRAAVRLFNEVKDLPIVDPHNHLDAKDIVENKPWNDIWEVEGATDHYVWELMRRCGVSEEYITGSRSNKEKWLALAKVFPRFVGNPTYEWIHLDLWRRFNIKKVISEETAEEIWEETKKKLPEMTPQKLLRDMKVEILCTTDDPVSTLEHHRKAKEAVEGVTILPTWRPDRAMNVDKEGWREYVEKMGERYGED-TSTLDGFLNALWKSHEHFKEHGCVASDHALLE--------PSVYYVDENRARAVHEKAFSGEKLTQDEINDYKAFMMVQFGKMNQETNWVTQLHIGALRDYRDSLFKTLGPDSGGDISTNFLRIAEGLRYFLNEFDGKLKIVLYVLDPTHLPTISTIARAFPNVYVGAPWWFNDSPFGMEMHLKYLASVDLLYNLAGMVTDSRKLLSFGSRTEMFRRVLSNVVGEMVEKGQIPIKEARELVKHVSYDGPKALFF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1J5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 57271 for 1053 contacts (54.4/contact) +
2D Compatibility (PS) -15093 + (NN) 619 + (LL) 1040
1D Compatibility (HY) 8400 + (ID) 750
Total energy: 51487.0 ( 48.90 by residue)
QMean score : -0.009
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