Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIDFNIINNMININTKRQITGFFVYIIGFSGSGKLSTAIELSNMIDALIVNSNFSNNTQVCSIYDNVFEHNHIPEEVQDRIYNIAQIMLQAIEAYLIHSKNYIFIDELMKNNDHNTKMYNSVVELSKRMNTQILPIVLRCDLLTLQKRIKLKRQRENKKATNISSIIENFRTH-DSFIPPNAIEIENSNMSIKEVAEKITSQMHKLSQINSIYTKG
1ZUH Chain:A ((2-160))
----------------------QHLVLIGFMGSGKSSLAQELGLALKLEVLDTDMIISERVGLSVREIFEELG-----ED---NFRMFEKNLIDELKTLKTPHVISTGGG--I-----VMHEN---LKGL---GTTFYLKMDFETLIKRLNQ--------LNNLTQAKELFEKRQALYEKNASFIIDARG-GLNNSLKQVLQF--------------
General information:
TITO was launched using:
RESULT:
Template:
1ZUH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -90225 for 1113 contacts (-81.1/contact) +
2D Compatibility (PS) -15863 + (NN) -2563 + (LL) 4508
1D Compatibility (HY) -4800 + (ID) 1400
Total energy: -110343.0 ( -99.14 by residue)
QMean score : 0.369
(partial model without unconserved sides chains):
PDB file :
Tito_1ZUH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ZUH-query.scw
PDB file :
Tito_Scwrl_1ZUH.pdb
: