Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDEDLELLKFYYEVGIDCTLTEGNEEKKVEKEKNSKAIQSPTIQAEVQKKEQQSMFPSDWIIEARKLASKCNSMDELRSAVKSFEGCEIKKTSTNTVFSDGNQSAKIMLVGEAPGANEDLKGIPFCGASGMLLDKMLSAINLDRTKVYISNTVFWRPPGNRKPTDLELDMCRPFVEKHIALISPHILILVGGISCYSLLDNTKT-ISTLRGRFHTYTNQYLSYSITTAVIFHPAYLLRQP--AQKRLAWEDLKKIREYLNSTNNCTGV
1L9G Chain:A ((1-191))
-------------------------------------------------------------------MYTREELMEIVSERVKKCTACPLHLNRTNVVVGEGNLDTRIVFVGEGPGEEEDKTGRPFVGRAGMLLTELLRESGIRREDVYICNVVKCRPPNNRTPTPEEQAACGHFLLAQIEIINPDVIVALGATALSFFVDGKKVSITKVRGNPIDWLG-----GKKVIPTFHPSYLLRNRSNELRRIVLEDIEKAKSFIKKE------
General information:
TITO was launched using:
RESULT:
Template:
1L9G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123372 for 1531 contacts (-80.6/contact) +
2D Compatibility (PS) -20969 + (NN) -13281 + (LL) 5704
1D Compatibility (HY) -14000 + (ID) 3100
Total energy: -169018.0 ( -110.40 by residue)
QMean score : 0.595
(partial model without unconserved sides chains):
PDB file :
Tito_1L9G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1L9G-query.scw
PDB file :
Tito_Scwrl_1L9G.pdb
: