Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDLKTMMLNFGPQHPAAHGVLRLVLEMDGEIIERADPHIGLLHRGTEKLIEHKTYLQALPYFDRLDYVSPMSQEHAYSLCVEKLLQCEVPIRAKYLRVLFCELTRILNHLLNIS-----------------------------------------------------------------------SQALDVGAMTPLLWLFEEREKILEFYERASGARFHAAYIRPGGV--AADVPEGLIEDIAKFIEQFPQYIDDVDELLTENRIWKQRTVG--------------------ISEISIKQALDWGF-------------SGPMLRAAGLAWDLRKSQPYEIYDQLDFDIPVGQN--------------------GDCYDRYLVRMEEIRQSVSLVKQCIEKIPEGPVKTEDRKISPPPRT-EMKRSMEALIHHFKLYSEGYHV------------PEGEAYAAVEAPKGEFGVYIVSDGTNRPYRCRIRAPGFAHL---------QALDFMAKGHML------ADVAAIIGSLDIVFGEIDR |
| 2FRV Chain:B ((7-536)) | -------NKIVVDPITRIEGHLRIEVEVEGGKIKNAWSMSTL-FRGLEMILKGRDPRDAQHFTQRACGVCTYVHALASVRAVDNCVGVKIPENATLMRNLTMGAQYMHDHLVHFYHLHALDWVNVANALNADPAKAARLANDLSPKKTTTESLKAVQAKVKALVESGQLGIFTNAYFLGGHPAYVLPAEVDLIATAHYLEALRVQVKAARAMAIFGAKNPHTQFTVVGGCTNYDSLRPERIAEFRKLYKEVREFIEQVYITDLLAVAGFYKNWAGIGKTSNFLTCGEFPTDEYD----LNSRYTPQGVIWGNDLSKVDDFNPDLIEEHVKYSWYE-GAGAHHPYKGVTKPKWTEFHGEDRYSWMKAPRYKGEAFEVGPLASVLVAYAKKHEPTVKAVDLVLKTLGVGPEALFSTLGRTAARGIQCLTAAQEVEVWLDKLEANVKAGKDDLYTDWQYPTESQGVGFVNAPRGMLSHWIVQRG-GKIENFQLVVPSTWNLGPRCAEGKLSAVEQALIGTPIADPKRPVEILRTVHSYDPCIACGVH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FRV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136166 for 3119 contacts (-43.7/contact) +
2D Compatibility (PS) -39083 + (NN) -6239 + (LL) 1416
1D Compatibility (HY) -6000 + (ID) 2800
Total energy: -188872.0 ( -60.56 by residue)
QMean score : 0.333
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