Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------------------------MEEACKTCEESQREL---ERELENLESQLSAVEKE-KEDLENESAELQKQVQTLKEDKKMCKKD------------------------------------------------------------------------------------------------------------------- |
| 1QOY Chain:A ((-4-298)) | SMAEIVADKTVEVVKNAIETADGALDLYNKYLDQVIPWQTFDETIKELSRFKQEYSQAASVLVGDIKTLLMDSQDKYFEATQTVYEWCGVATQLLAAYILLFDEYNEKKASAQKDILIKVLDDGITKLNEAQKSLLVSSQSFNNASGKLLALDSQLTNDFSEKSSYFQSQVDKIRKEAYAGAAAGVVVGPFGLIISYSIAAGVVEGKLIPELKNKLKSVQNFFTTLSNTVKQANKDIDAAKLKLTTEIAAIGEIKTETETTRFYVDYDDLMLSLLKEAAKKMINTCNEYQKRHGKKTLF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QOY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 18256 for 235 contacts (77.7/contact) +
2D Compatibility (PS) -6942 + (NN) -7687 + (LL) 0
1D Compatibility (HY) 1600 + (ID) 100
Total energy: 5127.0 ( 21.82 by residue)
QMean score : 0.759
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