Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKIKVGVIGCSGRMGKRILNELITNTQVEIAGAVARLGSKYIGSDIGSAVYHSSNLGIKVTSSISDVFESSDVVIDFTTKECMLACLKAAMKFKTPLVSGTTGIESINLKKY---AAKIPILWSANMSVGVNVLLKLVKKAAEFLDNEYDVEIWEMHHNLKKDSPSGTAMEFGKAIANALKVDFQPYQHSHNSSNIREKGKIGFAVSRGGGVVGDHSVMFINSDERIELNHKAIDRTTFARGAVRAAIWLYENKRETPGLYSMQDVI |
3QY9 Chain:B ((49-230)) | ---------------------------------------------------------------IADV-KGADVAIDFSNPNLLFPLLDE--DFHLPLVVATTGEKEKLLNKLDELSQNMPVFFSANMSYGVHALTKILAAAVPLLD-DFDIELTEAHHNKKVDAPSGTLEKLYDVIV-SLKENVTPVYDRHELNEKRQPQDIGIHSIRGGTIVGEHEVLFAGTDETIQITHRAQSKDIFANGAIQAAERLVNKPNGFYTFDNL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66051 for 1222 contacts (-54.1/contact) +
2D Compatibility (PS) -19037 + (NN) -6755 + (LL) 4284
1D Compatibility (HY) -12400 + (ID) 3550
Total energy: -103509.0 ( -84.70 by residue)
QMean score : 0.431
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