Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHELSHMVENELNLSLEQEFLYKVYQDIERNLKQANIFVQKIIGQVIFKEIQAYQAAKPRTSELFALF----
2JMS Chain:A ((1-63))
-------TDPEEHFDPNTNCDYTNSQDAWDYCT--NYIVNSSCGEICCNDCFDETGTGACRAQAFGNSCLNW
General information:
TITO was launched using:
RESULT:
Template:
2JMS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -8135 for 420 contacts (-19.4/contact) +
2D Compatibility (PS) -5765 + (NN) 5238 + (LL) 1020
1D Compatibility (HY) -400 + (ID) 400
Total energy: -8442.0 ( -20.10 by residue)
QMean score : 0.061
(partial model without unconserved sides chains):
PDB file :
Tito_2JMS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JMS-query.scw
PDB file :
Tito_Scwrl_2JMS.pdb
: