Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFDVTILTIFPEMFPGFLNYSLAGKALEKKIWNLQVINIRFFAKDRHLTVDHIPYGGGAGMIMRPDVVGDAVDSVLSTHKDTKFIYMTPSGTKFDQSIARELVGFPHITILCGRFEGIDQRVIDEY----TPYELSIGDYILSGGEPAAMVILDVCVRLLPGVVNNSGSITEESFSYSGGVLEYPQYTRPKQWRKHRVPKILLSGNHKKISDWRQKQSQVITKRRRPELLDGEINDKFT
3QUV Chain:A ((4-231))
SMKIDVVTIFPEYLQ-PVRQSLPGKAIDAGLVDVAVHDLRRWTHDVHKSVDDSPYGGGPGMVMKPTVWGDALDEICTS--ETLLVVPTPAGYPFTQETAWQWSTEDHLVIACGRYEGIDQRVADDAATRMRVREVSIGDYVLNGGEAAALVIIEAVLRLVPGVLGN------------ASLLEGPSYTRPPSWRGMDVPPVLLSGDHAKIAAWRAEQSRQRTIERRPDLL---------
General information:
TITO was launched using:
RESULT:
Template:
3QUV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -196330 for 1503 contacts (-130.6/contact) +
2D Compatibility (PS) -22244 + (NN) -3955 + (LL) 464
1D Compatibility (HY) -18400 + (ID) 4900
Total energy: -245365.0 ( -163.25 by residue)
QMean score : 0.496
(partial model without unconserved sides chains):
PDB file :
Tito_3QUV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QUV-query.scw
PDB file :
Tito_Scwrl_3QUV.pdb
: