Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEAYMLASNSTETILVADQNIYNSSASNNPALNTQDLSGSTPDKDKYVTLNSKEEWDKFFKLQNNPSTNITNKVRTKPHVRKNSNGMYRYTAEENKYNGKEIIGKVAEQIKEEISQKIKSDTMKLVKLKESKNEDNSVKPAIRIVLNDNVKEINMADLLSGSVCKEYNVKAITFCFPDKSNTRGIRCRIDEHGTRIYEVANGSYEMDLRWYCEGKECKIKILMKDDGSIRLIEDNGITEEQLKAHKEIRVGRQYEAKSLHEALALQLPQLQQKCSETTEILSRLADVSTSQAQQVLSAQVSK |
| 2PND Chain:A ((0-118)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------GHPTLKTPESVTGTWKGDVKIQCI--------YDPLRGYRQVLVKWLVRHGSDSVTIFLRDS--------TGDHIQQAKYRGRLKVSHKVPGDV---SLQINTLQMDDRNHYTCEVTWQTPDGNQVIRDKIIELRVRK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PND.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 40750 for 798 contacts (51.1/contact) +
2D Compatibility (PS) -12061 + (NN) 2745 + (LL) 10664
1D Compatibility (HY) 6400 + (ID) 250
Total energy: 48248.0 ( 60.46 by residue)
QMean score : ?
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