Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFIGNRNRNKVERAISEIRRGLPIIIYDKSNYLLVAAAETLEKDLFNQYGLISGKIYVILPSSKVTCISQNVEHSSKRLLINNFDELFHLVNCSKEDHTKELQRSKAIDECAITLLKSSELLPYALVVDVNFKDEYEMRGWCEKSDVIALDVLFINNFQQNQDIYEVCKTPLFLKQTQKVNIISYRTCNGRKEHYAIIIGNPGKNSEPLVRVHSSCYTGDLLDSLSCDCRSQLHQAIQIMTDSGNGIILYLMQDGRGIGLTNKLRAYDM-QRKYNLDTVDANRILGFEDDERSFAVAAEMLKKLGIKKIQLLTNNGRKLSELKNNGIEVTRCLPLIMERNKYNDSYIETKFSRLGHRLRTF |
| 1JXH Chain:A ((23-288)) | ---------------MQRINALTIAGTDPSG----GAGIQADLKTFSALGAYGCSVITALVAENTCG-VQSVYRIEPDFVAAQLDSVF---------------SDVRIDTTKIGMLAETDIVEAVAERLQRHH-----------VRNVVLDTVML---LLSPSAIETLRVRLLPQ--------------------VSLITPNLPEAAALL------------DAPHARTEQEMLAQGRALLAMGCEAVLM--KGDWLFTREGEQRFRVNTKNTHGTGCTLSAALAALRPRHRSWGETVNEAKAWLSAALAQADTLE------------------------------VGKGIGPVHHFHAWW |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JXH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80894 for 2173 contacts (-37.2/contact) +
2D Compatibility (PS) -25827 + (NN) -4194 + (LL) 7816
1D Compatibility (HY) -800 + (ID) 1500
Total energy: -105399.0 ( -48.50 by residue)
QMean score : 0.340
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