Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHSKPPWLRAKAPTGEIFNETLNTVKLHGLHTVCEEAACPNIGECWNKRHATVMILGSVCTRACAFCNVATGIPNKLDPHEPENLAKAIKKLNLKYVVITSVDRDD-LPDGGASQFIKCIEEIRKITPETTVEILTPDFLNKKGAFEAIAVASPDVYNHNIEMVPR-LYARIRP--RARYFHSLYLLKMVKQINPKLLTKSGLMVG--L----GETKEEVLQVMDDLRSAEVDFITIGQYLQPTPKHAKIDRYVTPEEFEHYKYIAYSKGFLVVASSPLTRSSYHAEEDFNRLKACR |
| 2FTP Chain:A ((26-178)) | ---------------------------------------------------------------------------PIEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVP-Q-MAGSAEVFAGIRQR-PGVTYAALAP----NLKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQ--HQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAVFDSSVAG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FTP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57353 for 1064 contacts (-53.9/contact) +
2D Compatibility (PS) -15351 + (NN) -6491 + (LL) 4736
1D Compatibility (HY) -3200 + (ID) 1000
Total energy: -78659.0 ( -73.93 by residue)
QMean score : 0.399
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