Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDIENNLQDLKRKFNYIERKLENPTNLSQKEFINLSKEYSELRPIIKIINEYDTLKKEILDLEEIIKDENSEYDIKELAKEEFFEKQKVLLPQVKAKLKLALLPKDEDDSRNAILEIRAGTGGEEAALFAAMLFRMYQKYAERRNWKFEPISISSTGIGGYKEASALINGTEVFARLKFESGVHRVQRVPETESSGRLHTSAATVAILPEVEEVDFKIEEKDLRIDVYRSSGPGGQSVNTTDSAVRVTH------LP-----------------TE-MVVIQQDEKSQHKNKAKALKVLRARLYEIERQKKEIERSTMRKSQIGSGDRSERIRTYNFPQSRITDHRINLTSHQLEQIIKEGELDEFIEVLISRNEAERLAGES |
2JVA Chain:A ((7-101)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NVHLPDAEIELTAIRAQGAGGQNVNKVSSAMHLRFDINASSLPPFYKERLLALNDSRITSDGVIVLKAQQYRTQEQNRADALLRLSELIVNAAKLEHHHHHH------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JVA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8799 for 387 contacts (-22.7/contact) +
2D Compatibility (PS) -8227 + (NN) -8917 + (LL) 21684
1D Compatibility (HY) -4800 + (ID) 950
Total energy: -10009.0 ( -25.86 by residue)
QMean score : 0.676
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