Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLNEIRERFIKFFVRNNHKQVFSSPLIPEHDPTLMFTNAGMVQFKNIFTGIQKTDIKRAVSSQKCLRVGGKHNDLENVGYTTRHHTFFEMLGNFSFGDYFKETAIEFAWKFITE--ELSLDKNRLSITIYHTDDKSYEIWRKVSGFSNDKIIRIA-------TDDNFWSMGNIGPCGPCSEIFYDYAKPN-------LQNDD-RIVEIWNLVFMEFNKDEEGNLQKLPKKCIDTGMGLERVAAVMQNVYDNYDIDLFSALISKSQEYCGNV-ENKAAHKIIADHLRAAAFLIAEGVLPGNEGRNYILRRLIRRAVRYIHQLGYNDPLLHRIFPVLIDSTSSAYMGGVYPELIRAKSLIETTLKSEEENFKDTLIKGINLLKKFTTDLKPGDTLSGESAFKLYDTYGFPLDITLDILKERKINFDQKGFDNAMEEQKERARAKWTGSGEKSIEQIWFNLIDKFGKTEFVGYEFSEVKDAKVLVILSSKNEVIDSAKEGEKITIILDKTPFYGESGGQVGDTGSFIIPSITPVLDTKIQKKNDRSCDRITEGIAIVENTNKVNDLYLHRCIVKSGSICKDDIVTASTDKERRQNLRRNHSATHLLHFALRKILGDHVTQKGSLIAPDRLRFDFSHNTQVTRDQLSLIEDMVNSLIRENLSAFTKIQSMNQAIGEGAMALFGKKYGDQVRVVNIGDSKELCGGTHVERTGEIGLFKIITECSIASGVRRIEALTGQEAIDYARDNEINLRKIAELVKAPVNEITSRLSILNQERKESETKIKSLYKKLVSAENIKSIEINGMNFVSHSFTDIPANIVREFTLQQQKPKTVIAFTAMEKNKTVLIVKVSKDLVDKISTKELVSTVTGGVCGENAELTQTGCDSSDIFTAIYSYLTR |
3HY0 Chain:A ((2-439)) | KSTAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGMNQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDYFKLDAILFAWLLLTSEKWFALPKERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDNKGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQFNRQADGTMEPLPKPSVDTAMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDLSNKSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKLVGPLID-----VMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGF--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HY0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -249233 for 3611 contacts (-69.0/contact) +
2D Compatibility (PS) -45372 + (NN) -15132 + (LL) 30696
1D Compatibility (HY) -40000 + (ID) 11250
Total energy: -330291.0 ( -91.47 by residue)
QMean score : 0.550
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