Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHKYKNIGYVASESPKSQEVSKLLQKLNFI----NITEENKSEVDLLVVVGGDGLMLHTLHNYVVGNKDIHVYGVNTGSVGFLMNKYFSSSEDLIDNIEHATSAQLTLLKMEAIDLSGKKYHHVAVNEVYVFRK-ANQIVEMNVAINSKLKMEKFRGDGIILSTPTGSTAYNFSAGGPILPLNSNLFALTSINSYYPRHWNGALISNDTIVQIDINNAQNRPALVVSDYKELHN-ISQIKMQKDHENTVTLLFDKDYSLDERIFDRQFLY |
| 1Z0S Chain:A ((30-275)) | ----MRAAVVYKTDGHVKRIEEALKRLEVEVELFNQPSEELENFDFIVSVGGDGTILRILQKLK---RCPPIFGINTGRVGLLTHASPENFEVELKKAVE-KFEVERFPRVSCSAM----PDVLALNEIAVLSRKPAKMIDVALRVDGV-EVDRIRCDGFIVATQIGSTGYAFSAGGPVVEPYLECFILIPIAPFRFG-WKPYVVSMERKIEVIAE-----KAIVVADGQKSVDFDGEITIEKSE-FPAVFFKNE--KRFRN-LFGKVRS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1Z0S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -120256 for 1997 contacts (-60.2/contact) +
2D Compatibility (PS) -25886 + (NN) -5594 + (LL) 1168
1D Compatibility (HY) -13600 + (ID) 2600
Total energy: -166768.0 ( -83.51 by residue)
QMean score : 0.446
|
|
|