Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKYFLRIDNVRVVGIDVEIKKQSSVCEQMRFRIGRTSLLSTLSRVSGVVERRNAIDILACINIKAQHGSIKLMATDLDISIFASLA-ADVLTEGEVKVSAHTLHDIVKKLPADLDVNFEVNDQGKLLISYGNANFSLPNVVLNKLPVLEEGDHKYDFTLLNTDLIDLLNKTKFAVSLDDTRYNLNGIYLHTDEQFLYCVATDGHRLSCVKKPKPQNINSEFGVIIPRKTVIELLKVLDDCD-EINIKLSDRKIKFTCGKYIIISKLIDGAFPDYKCVIPASQDKQMVVESSKLASVIDRVSVVVSDRIKSIEFSLQEKSLTLHSNSQECSDATEFIEVDYNGAPIEIGFNSRYLLDALSCIKS-KCKFSLSDSSSATVITDENDPNVLYIVMPVRT |
| 4TSZ Chain:D ((1-367)) | ---------------------------HMHFTIQREALLKPLQLVAGVVE--QTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVVLEDAAEPGEITVPARKLMDICKSLPNDVLIDIRVEEQ-KLLVKAGRSRFTLSTLPANDFP---EGPGSLNFSIAQSKLRRLIDRTSFAMAQQDVRYYLNGMLLEVNGGTLRSVATDGHRLAMCSLDAQIPSQDRHQVIVPRKGILELARLLTEQDGEVGIVLGQHHIRATTGEFTFTSKLVDGKFPDYERVLPRGGDKLVVGDRQQLREAFSRTAILSNEKYRGIRLQLSNGLLKIQANNPEQEEAEEEVQVEYNGGNLEIGFNVSYLLDVLGVIGTEQVRFILSDSNSSALVHEADNDDSAYVVMPMRL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4TSZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -279096 for 2882 contacts (-96.8/contact) +
2D Compatibility (PS) -38705 + (NN) -10545 + (LL) 2996
1D Compatibility (HY) -32000 + (ID) 6350
Total energy: -363700.0 ( -126.20 by residue)
QMean score : 0.557
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