Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARNNPNIKLLYIRDLFAKECKEIEEYCILGK------KQHIQISPEEGKLLSLFIKIHKVRSIVEIGTLYGYSSICMAKALPEYGHIYTIENNPKHFKIAKKNFNAFNMSNKITLIVGNALEKLAEL--SAKAP------------YDMIFIDADKAGYPKYLDWAESYIKQDGLIVADNTLLLNTVFLKSPPKEVLEKSWRAMREFNYRLSDEKKYCSILIPTDEGMTIALKLT
2HNK Chain:C ((3-230))
--RKNISLTESLEEYIFRNSVREPDSFLKLRKETGTLAQANMQISPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADNVLWDGSVADLSHQ----EPSTVGIRKFNELVYNDSLVDVSLVPIADGVSLVRKRL
General information:
TITO was launched using:
RESULT:
Template:
2HNK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118420 for 1638 contacts (-72.3/contact) +
2D Compatibility (PS) -22563 + (NN) -9551 + (LL) 888
1D Compatibility (HY) -16400 + (ID) 3750
Total energy: -169796.0 ( -103.66 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_2HNK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HNK-query.scw
PDB file :
Tito_Scwrl_2HNK.pdb
: