Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMMIFRLLFLLVFISVNSYAVIKQDLSNNHYIQKINEITSKELLLPLPDDKLLGDSKAPILMIEYASLTCYHCSLFHREVFPEIKKKYIDTGKMLYIFRHFPLDYR-GLKAAMLSYCYEKQEDYFNFNKAVFNSIDSWNYSNLSDLTVLQKVAALSNLKQDTFNRCINDKEVMDKIINDKSLAINKLGIMATPIFFIKLNNDRSHTEPNKIRHEGYKAQEYFTNVIDRLYEKAIVK
3GYK Chain:A ((10-174))--------------------------------------------NDPNAPVLGNPEGDVTVVEFFDYNCPYCRRAMAEVQ-GLVDAD---PNVRLVYREWPILGEGSDFAARAALAARQQGKYEAFHWALMGMSGKA------NETGVLRIAREVGLDTEQLQRDMEAPEVTAHIAQS-MALAQKLGFNGTPSFVVEDAL-----------VPGFVEQSQLQDAVDRARKAA---


General information:
TITO was launched using:
RESULT:

Template: 3GYK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99264 for 1325 contacts (-74.9/contact) +
2D Compatibility (PS) -17489 + (NN) -9424 + (LL) 5716
1D Compatibility (HY) -2000 + (ID) 1650
Total energy: -124111.0 ( -93.67 by residue)
QMean score : 0.552

(partial model without unconserved sides chains):
PDB file : Tito_3GYK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GYK-query.scw
PDB file : Tito_Scwrl_3GYK.pdb: