Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLEALKRVGTDFVLKTKDLFTPSESQVYVKDLRKVMIYKDGRKCRYPKNYDQVVESGKVIENKDMHGNSVLDKDRNPTYRLLYGNKNKDGWPIFELTKIMEIGDKSYFTIKFLVDKGKVSKGKCDNNDYHSFYKPFGFLKIDLEKYLPVFEAQKTKKSTCSFEFTNSSVPTKKTKNKKSNEVKEIVDEKERNGELLYTSDYKKLSTSFFEIRDQSNNLELGKSI----ISVPIVFAAGLAKICAKLLTYIPMEL---------GEYLIGKQSLIAKFFGYFFLFT-PAVAVKNSVNMLATLLKLPICAFVANKEEYGDAYWTMWKYQLKECWQEAKNDYSVIKDGKRSELKKKDYPKREVAGTWKELDAKRSIIEEELEGRLSKGDENMTDSGKQEKDLEQDTTQPRTLIQRKIDYVSKLNEERDQDKCVSQIHN |
| 4J72 Chain:A ((20-363)) | -----------FAFNVLKYITF-RSFTAVLIAFFLTLVLSPSFINRLKKYT------------PTMGGIVILIVVTLSTLLLMRWDIKYTWVVLLSFL-------SFGTIGFWDDYVKLKNKKGISIKTKFLLQVLSASLISVLIY---YWADIDTILYFPF-----------------------------FKELYVDLGVLYLPFAVFVIVGSANAVNLTDGLDGLAIGPAMTTATALGVVAYAVGHSKIAQYLNIPYVPYAGELTVFCFALVGAGLGFLWFNSFPAQMFMGDVGSLSIGASLATVALLTKSEFIFAVAAGVFVFETISVILQIIYFRW--TGGKRLFKRAPFHHHLELNGLPEPKIVVRMWIISILLAIIAISMLK----------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4J72.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 32087 for 2636 contacts (12.2/contact) +
2D Compatibility (PS) -32346 + (NN) -9654 + (LL) 7528
1D Compatibility (HY) -14800 + (ID) 2600
Total energy: -19785.0 ( -7.51 by residue)
QMean score : 0.159
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