Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDNNNDDLHYCSFCNKAQNEVDKLITNSSDGLKVFICNECIELSHKAISQKKGGSFNSDYMSDVKLLLKKPEDIKIFLSKHVVGQEHAQHVLSVAMYNHCQSMAQFNAISDVEIEKSNVMLIGPTGSGKTLLAKTLAKVSDVPFAMADATTLTEAGYVGDDVESVLSRLLQAANYDVAKAQRGIVFIDEIDKITRKSESTSITRDVSGEGVQQALLKIMEGTVAYVPPQGGRKHPQQEFIQVDTNNILFICGGAFEGLNKIIEAR-KKGTSVGFGADISQSKEQKKKNTLHDVQPEDLIKFGLIPEFVGRVPITAVLDELDHEDLVHVLIEPRNALIKQYKALLAFSKVNLEFSDEAISAIAEKAMSYKTGARMLRAILESLLLDVMYTAGNGGFEGSTIVITKEMVELGKAVINHNNKGNVITVND
4I4L Chain:D ((3-324))-------------------------------------------------------------------LPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNGDTS--VELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLT--GYVGEDVENIIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKS------RDVSGEGVQQALLKLIEGT----------------FLQVDTSKILFICGGAFAGLDKVISHRVET---------------ASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALTKQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMEDVEKVVIDESVIDGQSEPLLIY-----------


General information:
TITO was launched using:
RESULT:

Template: 4I4L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -206717 for 2176 contacts (-95.0/contact) +
2D Compatibility (PS) -29658 + (NN) -10196 + (LL) 4236
1D Compatibility (HY) -33200 + (ID) 8850
Total energy: -284385.0 ( -130.69 by residue)
QMean score : 0.501

(partial model without unconserved sides chains):
PDB file : Tito_4I4L.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4I4L-query.scw
PDB file : Tito_Scwrl_4I4L.pdb: