Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYVVIINIVLLKVLMVLTITILSGGFSRERKISLMSGKAVKKALDSLSYNAIEIDVNSN--TA--------------------------E----KLKKINPDLAFIALHGPYGEDGCIQGLLEILGIKYTHSGVMASAIAMNKAMSKHIFRSLGIDTPKGYIISRGDIL-------K-NNIKIDYPYVLKPINEGSSIGVHITFSHEDYLKLKNMFSVIPVHDAGIEEEEPVWITRDLMIIEEYIPGIELHTAVLLDE---AAGTMEIRPKNKFYDYKAKYTNGFAEHIFPAEIPDNIYEMTLEHALKVHRFLGCKTISRSDFRYNPKDNTLKMLEINTHPGFTELSLVPEIAKLTKGIDFNELVKIIIEDSLQHKKILEIK |
2I87 Chain:A ((3-347)) | ---------------KENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYITNDGDWRKQNNITAEIKSTDELHLENGEALEISQLLKESSSGQPYDAVFPLLHGPNGEDGTIQGLFEVLDVPYVGNGVLSAASSMDKLVMKQLFEHRGLPQLPYISFLRSEYEKYEHNILKLVNDKLNYPVFVKPANLGSSVGISKCNNEAELKEGIKE----------------AFQFDRKLVIEQGVNAREIEVAVLGNDYPEATWPGEVVKDVAF-----------VQLQIPADLDEDVQLTLRNMALEAFKATDCSGLVRADFFVTE-DNQIYINETNAMPGFTAFSMYPKLWE-NMGLSYPELITKLIELAKERHQDKQKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 2I87.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -111501 for 2386 contacts (-46.7/contact) +
2D Compatibility (PS) -31932 + (NN) -21001 + (LL) 4016
1D Compatibility (HY) -11200 + (ID) 4100
Total energy: -175718.0 ( -73.65 by residue)
QMean score : 0.432
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