Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNDYLSLLNPEQQSAVTKVDGPVLILAGAGTGKTRTITSRIAHIIRNGYAHSDEILAVTFTNKAANEMVSRVLKLTGTNILWLGTFHAIAAKILRRHADIVGLNPNFTIIGVDDQLQVIKNIINEVSPNNLSEKHSTIMNTIQKWKEKCLLPSEVEETQLFRPIYIIALKVYHQYQERLKFLNSVDFGDLLLYNIQLFNQKTEILSYYQGKFKYIMVDEYQDTNVIQYLWLKYLAKEHSNICCVGDDDQSIYSWRGAEVKNILKFSDDFKNAKIIKLECNYRSTSHILATASYVINHNKTRLEKKLWTTNIKGEKVNLIKLWDGKAEARFISEQILKLNKYRFSDMAVLVRATFQTRVLEEYFIKYSIPYKIISGVKFYERQEVRDVIAYLRLVTNNNDDLAFERIVNRPKRSIGPTTLKKIYTVAQGNKTSFFEAAKILVNSNQVIEKIKLSLNDFFNKIKAWEEMISVKPLHKFVKTIANQSGYIEMLENEEVTGLARIENVKELISSLKNFDNATTFLEHISLVMEVDNMNNDDTVHVMTLHAAKGLEFPCVFLPGWEEGLFPHQRSFEDKSGKALEEERRLAYVGITRAKEKLIISCADRREINNQWQPMYASRFLKELPRENVEVIKSNIAYC
2PJR Chain:B ((2-92))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DAVMLMTLHAAKGLEFPVVFLIGMEEGIFPHNRSLEDDD--EMEEERRLAYVGITRAEEELVLTSAQMRTLFGNIQMDPPSRFLNEIPAHLLETAS------


General information:
TITO was launched using:
RESULT:

Template: 2PJR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -33483 for 557 contacts (-60.1/contact) +
2D Compatibility (PS) -9608 + (NN) -3643 + (LL) 42896
1D Compatibility (HY) -10000 + (ID) 2700
Total energy: -16538.0 ( -29.69 by residue)
QMean score : 0.327

(partial model without unconserved sides chains):
PDB file : Tito_2PJR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PJR-query.scw
PDB file : Tito_Scwrl_2PJR.pdb: