Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYVCGPTVYDTAHIGNARSIVVYDVLFQLLKFCYGKATYVRNITDIDDKIINAANEKDSSIESISTYYTRAFHEDMRSINCVEPTHEPKAAE--NIKYIIELIEYLLQSGHAYESNKHIYFSIESYPE------------------YGALS---GKKI--DEL------EHGSRVEVG--------E--NK----------KHPG----DFVLWKPANDTDYKLSSYWNS-PWGEGRPG--------WHIE----CSAMSY------------AYLGK---DFDIHGGGIDLQFPHHENEIAQNKSAFAGSMFAKYWVHNGSLTVNKEKMSKSLFNIVKVRDLLDSGIKGEVIRYALFKT--HYRKPLDWTESVISES--QETLNKFYRLLRGIDV-ASI---------E------KSDVEVSRDFIETLKNDLNIPEALAILHEMATKINKTNNENEKLKLTESFIKSARFIGLLESSYQEWFTAGISYQEIKRLIDLRKVAKQNKDYDAADKIRDQLKQMGVTISDNEDGTTTW |
| 3H99 Chain:A ((22-471)) | VTCASPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFAGFNIS-YDNYHSTHSEENRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCEVCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTRSGALQEQVANKMQEWF--ESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGLMGSFKNLCDKRGDSVSFDEYWKKDSTAELYHFIGKDIVYFLSLFWPAMLEGS--NFRKPSNLFVHGYVTVNGAKMSKSRGTFIKASTWLNH-FDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGFINKRFDGVLASELADPQLYKTFTDAAEVIGEAW-ESREFGKAVREIMALADLANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRVLMTYLKPVLPKLTERAEAFLNTELTWDGIQQPLLGHKVNPFKALYNRIDMR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H99.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74896 for 2433 contacts (-30.8/contact) +
2D Compatibility (PS) -36390 + (NN) -11821 + (LL) 276
1D Compatibility (HY) -3600 + (ID) 2650
Total energy: -129081.0 ( -53.05 by residue)
QMean score : 0.373
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