Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | METDIVVIGAGPVGIFTAFQAGMLDMR-CHIIDVLDQAGGQCTALYPEKPIYDIPGYPV-ITAQKLIEQLMEQASPFEPVYHLSQRVEEIANNDSQSFIVVTSAGTKVKCKAIIIAAGNGIFEPNRPPLSGILEYENKSVFYNVNKI-SDFQDKIIVIAGGGDSAADWTVELSKVAKKIYVIHRRKEFRCVSETRNKLKLLESSGRIELVVPYQLHKLTGNDGQLSAVIIKNITSKEEKKISADFLLPFFGLSMDLGPIGS----WDIQLER-SRVVVDQATLRTSRDRIYAIGDVAAYLGKLKLILNGFAESTMACYDIYKVIHNSPVNFQYSTSKVVRGKKSDLL |
| 3R9U Chain:A ((4-311)) | -MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGM-PGGQITSSS---EIENYPGVAQVMDGISFMAPWSEQCMRFGLKH-EMVGVEQILKNSDGSFTIKLEGGKTELAKAVIVCTGS---APKKAGFKGEDEFFGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRAAPS---TVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKL-KDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGGQVSVDLK-MQTSVAGLFAAGDLRKDA--PKQVICAAGDGAVAALSAMAYIESL-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R9U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -281236 for 2603 contacts (-108.0/contact) +
2D Compatibility (PS) -32008 + (NN) -9651 + (LL) 1508
1D Compatibility (HY) -11200 + (ID) 3550
Total energy: -336137.0 ( -129.13 by residue)
QMean score : 0.557
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