Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVNHKNVKKMIKAIAKRTLINKMRKSKTRTAIRKLVDIIKSGNKENVTPAFRSAESNLHKCVSKGVIHKNTAARKISRLNAKVKALMTA
2YKR Chain:T ((2-85))--NIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDKAAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA--


General information:
TITO was launched using:
RESULT:

Template: 2YKR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7001 for 547 contacts (-12.8/contact) +
2D Compatibility (PS) -8504 + (NN) 3387 + (LL) 660
1D Compatibility (HY) 400 + (ID) 1450
Total energy: -12508.0 ( -22.87 by residue)
QMean score : 0.511

(partial model without unconserved sides chains):
PDB file : Tito_2YKR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YKR-query.scw
PDB file : Tito_Scwrl_2YKR.pdb: